Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
foxg1b | hinfp | ENSDARP00000020080 | ENSDARP00000051413 | Forkhead box G1b. | Histone H4 transcription factor. | 0.560 |
foxg1b | hmx4 | ENSDARP00000020080 | ENSDARP00000010904 | Forkhead box G1b. | H6 family homeobox 4. | 0.605 |
foxi1 | hinfp | ENSDARP00000133283 | ENSDARP00000051413 | Forkhead box I1. | Histone H4 transcription factor. | 0.812 |
foxi1 | plk1 | ENSDARP00000133283 | ENSDARP00000075786 | Forkhead box I1. | Serine/threonine-protein kinase PLK. | 0.474 |
gsc | hinfp | ENSDARP00000076522 | ENSDARP00000051413 | Homeobox protein goosecoid. | Histone H4 transcription factor. | 0.866 |
hinfp | foxg1b | ENSDARP00000051413 | ENSDARP00000020080 | Histone H4 transcription factor. | Forkhead box G1b. | 0.560 |
hinfp | foxi1 | ENSDARP00000051413 | ENSDARP00000133283 | Histone H4 transcription factor. | Forkhead box I1. | 0.812 |
hinfp | gsc | ENSDARP00000051413 | ENSDARP00000076522 | Histone H4 transcription factor. | Homeobox protein goosecoid. | 0.866 |
hinfp | hmx3a | ENSDARP00000051413 | ENSDARP00000095383 | Histone H4 transcription factor. | Homeobox protein HMX3; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development. Binds to the 5'-CAAGTG-3' core sequence (By similarity). Belongs to the HMX homeobox family. | 0.493 |
hinfp | hmx3b | ENSDARP00000051413 | ENSDARP00000127346 | Histone H4 transcription factor. | H6 family homeobox 3b. | 0.493 |
hinfp | hmx4 | ENSDARP00000051413 | ENSDARP00000010904 | Histone H4 transcription factor. | H6 family homeobox 4. | 0.493 |
hinfp | npat | ENSDARP00000051413 | ENSDARP00000133803 | Histone H4 transcription factor. | Nuclear protein, ataxia-telangiectasia locus. | 0.642 |
hinfp | plk1 | ENSDARP00000051413 | ENSDARP00000075786 | Histone H4 transcription factor. | Serine/threonine-protein kinase PLK. | 0.675 |
hinfp | taf8 | ENSDARP00000051413 | ENSDARP00000032165 | Histone H4 transcription factor. | Transcription initiation factor TFIID subunit 8; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. Mediates both basal and activator-dependent transcription (By similarity); Belongs to the TAF8 family. | 0.495 |
hinfp | vangl2 | ENSDARP00000051413 | ENSDARP00000031546 | Histone H4 transcription factor. | Vang-like protein 2; Plays a role in non-canonical Wnt/planar cell polarity (PCP) signaling to regulate convergent extension cell movements during gastrulation. Acts together with scrib and prickle1 and localizes prickle1 and dvl2/dsh to the plasma membrane. Has an overlapping role with kny during both convergent extension and eye development. In the eye, involved in establishing proper alignment of the anterior neural plate and midline cells expressing shha and shhb/twhh. Has indirect effects on a number of other developmental processes including notochord shape formation, neural prog [...] | 0.719 |
hmx3a | hinfp | ENSDARP00000095383 | ENSDARP00000051413 | Homeobox protein HMX3; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development. Binds to the 5'-CAAGTG-3' core sequence (By similarity). Belongs to the HMX homeobox family. | Histone H4 transcription factor. | 0.493 |
hmx3b | hinfp | ENSDARP00000127346 | ENSDARP00000051413 | H6 family homeobox 3b. | Histone H4 transcription factor. | 0.493 |
hmx4 | foxg1b | ENSDARP00000010904 | ENSDARP00000020080 | H6 family homeobox 4. | Forkhead box G1b. | 0.605 |
hmx4 | hinfp | ENSDARP00000010904 | ENSDARP00000051413 | H6 family homeobox 4. | Histone H4 transcription factor. | 0.493 |
npat | hinfp | ENSDARP00000133803 | ENSDARP00000051413 | Nuclear protein, ataxia-telangiectasia locus. | Histone H4 transcription factor. | 0.642 |
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