STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqcdIQ motif-containing D. (402 aa)    
Predicted Functional Partners:
mettl27
Methyltransferase-like 27.
      
 0.991
iqub
IQ motif and ubiquitin domain-containing.
   
  
 0.875
tpcn1
Two pore segment channel 1.
      
 0.867
rsph3
Radial spoke head 3.
   
  
 0.843
waif2
Wnt-activated inhibitory factor 2.
      
 0.834
cfap53
Cilia- and flagella-associated protein 53; May play a role in the beating of primary cilia and thereby be involved in the establishment of organ laterality during embryogenesis; Belongs to the CFAP53 family.
   
  
 0.780
bmpr1bb
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
      
 0.669
mycbpap
Mycbp-associated protein.
   
  
 0.634
tpbgl
Trophoblast glycoprotein-like.
      
 0.629
iqca1
IQ motif-containing with AAA domain 1.
   
  
 0.583
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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