Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ppm1fProtein phosphatase, Mg2+/Mn2+-dependent, 1F. (424 aa)    
Predicted Functional Partners:
arrdc2
Arrestin domain-containing 2.
    
 
 0.842
ess2
Ess-2-splicing factor homolog.
   
  
 0.836
dgcr2
DiGeorge syndrome critical region gene 2.
      
 0.831
wscd2
WSC domain-containing protein 2.
    
 
 0.815
crnkl1
Crooked neck pre-mRNA-splicing factor 1.
   
  
 0.807
ppp1r21
Protein phosphatase 1 regulatory subunit 21; Putative regulator of protein phosphatase 1 (PP1) activity. May play a role in the endosomal sorting process or in endosome maturation pathway.
      
 0.777
ascc2
Activating signal cointegrator 1 complex subunit 2.
      
 0.768
fem1b
Fem-1 homolog b.
   
 
 0.767
fem1c
Protein fem-1 homolog C; Probable component of an E3 ubiquitin-protein ligase complex, in which it may act as a substrate recognition subunit; Belongs to the fem-1 family.
   
 
 0.767
ypel1
Protein yippee-like; Belongs to the yippee family.
    
 
 0.757
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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