Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ascc2 | crnkl1 | ENSDARP00000048858 | ENSDARP00000100660 | Activating signal cointegrator 1 complex subunit 2. | Crooked neck pre-mRNA-splicing factor 1. | 0.870 |
ascc2 | dgcr2 | ENSDARP00000048858 | ENSDARP00000063070 | Activating signal cointegrator 1 complex subunit 2. | DiGeorge syndrome critical region gene 2. | 0.784 |
ascc2 | ess2 | ENSDARP00000048858 | ENSDARP00000116212 | Activating signal cointegrator 1 complex subunit 2. | Ess-2-splicing factor homolog. | 0.745 |
ascc2 | kansl2 | ENSDARP00000048858 | ENSDARP00000105294 | Activating signal cointegrator 1 complex subunit 2. | KAT8 regulatory NSL complex subunit 2. | 0.787 |
ascc2 | med15 | ENSDARP00000048858 | ENSDARP00000003782 | Activating signal cointegrator 1 complex subunit 2. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Required for cholesterol [...] | 0.655 |
ascc2 | ppm1f | ENSDARP00000048858 | ENSDARP00000051665 | Activating signal cointegrator 1 complex subunit 2. | Protein phosphatase, Mg2+/Mn2+-dependent, 1F. | 0.882 |
ascc2 | prcc | ENSDARP00000048858 | ENSDARP00000086697 | Activating signal cointegrator 1 complex subunit 2. | Proline-rich mitotic checkpoint control factor. | 0.772 |
ascc2 | prpf19 | ENSDARP00000048858 | ENSDARP00000097371 | Activating signal cointegrator 1 complex subunit 2. | PRP19/PSO4 homolog (S. cerevisiae). | 0.738 |
ascc2 | snw1 | ENSDARP00000048858 | ENSDARP00000138373 | Activating signal cointegrator 1 complex subunit 2. | SNW domain-containing 1. | 0.601 |
ascc2 | xab2 | ENSDARP00000048858 | ENSDARP00000010070 | Activating signal cointegrator 1 complex subunit 2. | Similar to Xab2 protein. | 0.697 |
crnkl1 | ascc2 | ENSDARP00000100660 | ENSDARP00000048858 | Crooked neck pre-mRNA-splicing factor 1. | Activating signal cointegrator 1 complex subunit 2. | 0.870 |
crnkl1 | dgcr2 | ENSDARP00000100660 | ENSDARP00000063070 | Crooked neck pre-mRNA-splicing factor 1. | DiGeorge syndrome critical region gene 2. | 0.792 |
crnkl1 | ess2 | ENSDARP00000100660 | ENSDARP00000116212 | Crooked neck pre-mRNA-splicing factor 1. | Ess-2-splicing factor homolog. | 0.820 |
crnkl1 | kansl2 | ENSDARP00000100660 | ENSDARP00000105294 | Crooked neck pre-mRNA-splicing factor 1. | KAT8 regulatory NSL complex subunit 2. | 0.908 |
crnkl1 | med15 | ENSDARP00000100660 | ENSDARP00000003782 | Crooked neck pre-mRNA-splicing factor 1. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Required for cholesterol [...] | 0.687 |
crnkl1 | ppm1f | ENSDARP00000100660 | ENSDARP00000051665 | Crooked neck pre-mRNA-splicing factor 1. | Protein phosphatase, Mg2+/Mn2+-dependent, 1F. | 0.881 |
crnkl1 | prcc | ENSDARP00000100660 | ENSDARP00000086697 | Crooked neck pre-mRNA-splicing factor 1. | Proline-rich mitotic checkpoint control factor. | 0.980 |
crnkl1 | prpf19 | ENSDARP00000100660 | ENSDARP00000097371 | Crooked neck pre-mRNA-splicing factor 1. | PRP19/PSO4 homolog (S. cerevisiae). | 0.999 |
crnkl1 | snw1 | ENSDARP00000100660 | ENSDARP00000138373 | Crooked neck pre-mRNA-splicing factor 1. | SNW domain-containing 1. | 0.999 |
crnkl1 | xab2 | ENSDARP00000100660 | ENSDARP00000010070 | Crooked neck pre-mRNA-splicing factor 1. | Similar to Xab2 protein. | 0.999 |
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