STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdkn2aipCDKN2A-interacting protein. (312 aa)    
Predicted Functional Partners:
xrn2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 
 0.910
tpra
Translocated promoter region a, nuclear basket protein.
    
 
 0.815
ptmaa
Prothymosin alpha-A.
    
 
 0.740
cirbpa
Cold-inducible RNA-binding protein a.
    
 
 0.643
mphosph6
M-phase phosphoprotein 6.
   
  
 0.594
trappc11
Trafficking protein particle complex subunit 11; Involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage.
      
 0.569
tmem145
Transmembrane protein 145.
      
 0.569
rpl6
Ribosomal protein L6.
      
 0.555
cdkn2a/b
Cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4).
    
 
 0.545
cirbpb
Cold-inducible RNA-binding protein b.
    
 
 0.521
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.