Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
klhl38aKelch-like protein 38. (583 aa)    
Predicted Functional Partners:
dusp27
Inactive dual specificity phosphatase 27; Required for myofiber maturation.
   
  
 0.797
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 
 0.774
spsb3a
SplA/ryanodine receptor domain and SOCS box-containing 3a.
      
 0.734
spsb3b
SplA/ryanodine receptor domain and SOCS box-containing 3b.
      
 0.734
ENSDARP00000131171
Si:dkey-23n7.10.
      
 0.734
klhl26
Kelch-like protein 26.
  
 
0.707
arrdc2
Arrestin domain-containing 2.
    
 
 0.671
ankrd29
Ankyrin repeat domain-containing protein 29.
    
 
 0.668
F1RDE7_DANRE
Si:ch73-190m4.1.
      
 0.663
tacc3
Transforming, acidic coiled-coil-containing protein 3.
    
 
 0.643
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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