Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
laptm4bLysosomal associated protein transmembrane 4 beta. (225 aa)    
Predicted Functional Partners:
LOC100151049
Lysosomal protein transmembrane 5.
     
 0.949
laptm4a
Lysosomal-associated protein transmembrane 4 alpha.
     
  0.944
spry2
Sprouty RTK-signaling antagonist 2.
    
   0.661
spry4
Sprouty homolog 4 (Drosophila).
    
   0.661
tmem184bb
Transmembrane protein 184bb.
   
 
 0.628
tmem184a
Transmembrane protein 184a.
   
 
 0.628
anapc15
Anaphase-promoting complex subunit 15.
      
 0.620
si:dkey-43k4.5
Si:dkey-43k4.5; Belongs to the potassium channel family.
      
 0.619
golga7
Golgin A7.
   
 
 0.614
golga7ba
Golgin A7 family, member Ba.
   
 
 0.614
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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