Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fuca1.2Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (451 aa)    
Predicted Functional Partners:
fuca2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
   
  0.875
zbtb8b
Zinc finger and BTB domain-containing 8B.
     
  0.638
spns1
Protein spinster homolog 1; Sphingolipid transporter.
   
  
 0.566
il1b
Interleukin-1.
      
 0.542
gmds
GDP-mannose 4,6 dehydratase.
   
  
 0.538
gla
Alpha-galactosidase.
   
 
 0.538
naga
Alpha-galactosidase.
   
 
 0.538
ltv1
Protein LTV1 homolog; Belongs to the LTV1 family.
      
 0.529
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
 
  
 0.529
glb1
Beta-galactosidase.
 
  
 0.520
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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