STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pitpnbPhosphatidylinositol transfer protein, beta. (272 aa)    
Predicted Functional Partners:
pitpnm3
PITPNM family member 3.
 
    
 0.902
plrdgb
PITP-less RdgB-like protein.
 
      0.900
pcnx1
Pecanex 1.
      
 0.865
sgsm2
Small G protein-signaling modulator 2.
      
 0.862
golph3l
Golgi phosphoprotein 3-like.
      
 0.803
golga1
Golgin A1.
   
  
 0.748
myo18ab
Myosin XVIIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.745
alox12
Arachidonate 12-lipoxygenase.
      
 0.743
sipa1l1
Signal-induced proliferation-associated 1-like 1.
   
  
 0.721
setd4
SET domain-containing 4.
   
  
 0.700
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.