STRINGSTRING
exosc6 protein (Danio rerio) - STRING interaction network
"exosc6" - Exosome complex component MTR3 in Danio rerio
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exosc6Exosome complex component MTR3; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events (271 aa)    
Predicted Functional Partners:
exosc8
Exosome component 8 (277 aa)
 
  0.999
exosc2
Exosome component 2 (295 aa)
   
  0.999
exosc3
Exosome component 3 (247 aa)
   
  0.999
exosc7
Exosome component 7 (291 aa)
 
  0.999
exosc9
Exosome component 9 (393 aa)
 
  0.998
exosc1
Exosome component 1 (194 aa)
     
  0.998
skiv2l2
Superkiller viralicidic activity 2-like 2 (1034 aa)
     
  0.997
exosc10
Exosome component 10 (899 aa)
     
  0.996
dis3
DIS3 exosome endoribonuclease and 3’-5’ exoribonuclease; DIS3 mitotic control homolog (S. cerevisiae); Belongs to the RNR ribonuclease family (950 aa)
     
  0.996
exosc5
Exosome component 5 (222 aa)
   
0.995
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (18%) [HD]