Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cdk2 | cdk4 | ENSDARP00000032448 | ENSDARP00000087219 | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | 0.554 |
cdk2 | cdkn1a | ENSDARP00000032448 | ENSDARP00000114199 | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | Cyclin-dependent kinase inhibitor 1A. | 0.992 |
cdk2 | cebpa | ENSDARP00000032448 | ENSDARP00000052365 | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | CCAAT/enhancer-binding protein. | 0.936 |
cdk2 | pparg | ENSDARP00000032448 | ENSDARP00000142487 | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] | 0.423 |
cdk2 | tp53 | ENSDARP00000032448 | ENSDARP00000116736 | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.924 |
cdk4 | cdk2 | ENSDARP00000087219 | ENSDARP00000032448 | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.554 |
cdk4 | cdkn1a | ENSDARP00000087219 | ENSDARP00000114199 | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | Cyclin-dependent kinase inhibitor 1A. | 0.983 |
cdk4 | cebpa | ENSDARP00000087219 | ENSDARP00000052365 | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | CCAAT/enhancer-binding protein. | 0.937 |
cdk4 | tp53 | ENSDARP00000087219 | ENSDARP00000116736 | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.892 |
cdkn1a | cdk2 | ENSDARP00000114199 | ENSDARP00000032448 | Cyclin-dependent kinase inhibitor 1A. | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.992 |
cdkn1a | cdk4 | ENSDARP00000114199 | ENSDARP00000087219 | Cyclin-dependent kinase inhibitor 1A. | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | 0.983 |
cdkn1a | cebpa | ENSDARP00000114199 | ENSDARP00000052365 | Cyclin-dependent kinase inhibitor 1A. | CCAAT/enhancer-binding protein. | 0.915 |
cdkn1a | gata1a | ENSDARP00000114199 | ENSDARP00000002330 | Cyclin-dependent kinase inhibitor 1A. | GATA-binding protein 1a. | 0.411 |
cdkn1a | runx1 | ENSDARP00000114199 | ENSDARP00000112019 | Cyclin-dependent kinase inhibitor 1A. | Runt-related transcription factor. | 0.501 |
cdkn1a | tp53 | ENSDARP00000114199 | ENSDARP00000116736 | Cyclin-dependent kinase inhibitor 1A. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of bax and fas antigen expression, or by repression of Bcl-2 expression. | 0.974 |
cebpa | cdk2 | ENSDARP00000052365 | ENSDARP00000032448 | CCAAT/enhancer-binding protein. | Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. | 0.936 |
cebpa | cdk4 | ENSDARP00000052365 | ENSDARP00000087219 | CCAAT/enhancer-binding protein. | Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. | 0.937 |
cebpa | cdkn1a | ENSDARP00000052365 | ENSDARP00000114199 | CCAAT/enhancer-binding protein. | Cyclin-dependent kinase inhibitor 1A. | 0.915 |
cebpa | fabp11a | ENSDARP00000052365 | ENSDARP00000021916 | CCAAT/enhancer-binding protein. | Fatty acid-binding protein H6-isoform; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.673 |
cebpa | gata1a | ENSDARP00000052365 | ENSDARP00000002330 | CCAAT/enhancer-binding protein. | GATA-binding protein 1a. | 0.719 |
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