Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
itln2Intelectin 2. (341 aa)    
Predicted Functional Partners:
ogfrl2
Opioid growth factor receptor-like 2.
      
 0.886
cyb5d1
Cytochrome b5 domain-containing protein 1; Belongs to the cytochrome b5 family.
    
 
 0.881
mon1bb
MON1 secretory-trafficking family member Bb.
      
 0.661
mon1ba
MON1 secretory-trafficking family member Ba.
      
 0.661
si:dkey-22f5.9
Si:dkey-22f5.9.
      
 0.595
tmem39b
Transmembrane protein 39B.
      
 0.594
jac4
Jacalin 4.
      
 0.594
LOC564481
Hypothetical protein LOC564481.
      
 0.594
ENSDARP00000142590
Si:dkeyp-32g11.8.
      
 0.594
LOC564660
Hypothetical protein LOC564660.
      
 0.594
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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