STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnrnpa0lHeterogeneous nuclear ribonucleoprotein A0,-like. (302 aa)    
Predicted Functional Partners:
prpf4ba
Pre-mRNA-processing factor 4Ba.
   
 
 0.978
prpf4bb
Pre-mRNA-processing factor 4Bb.
   
 
 0.876
wdr4
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4; Non-catalytic component of a methyltransferase complex required for the formation of N(7)-methylguanine in a subset of RNA species, such as tRNAs, mRNAs and microRNAs (miRNAs). In the methyltransferase complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Also required for the formation of N(7)-methylguanine at internal sites in a subset of mRNAs. Also required for methylation of a specific subset [...]
   
  
 0.867
F1REK7_DANRE
Ig-like domain-containing protein.
      
 0.839
LOC101883412
Ig-like domain-containing protein.
      
 0.839
irf2bpl
Interferon regulatory factor 2-binding protein-like.
   
  
 0.810
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.698
srsf2a
Serine and arginine-rich-splicing factor 2a.
  
 
 0.679
srsf2b
Serine and arginine-rich-splicing factor 2b.
  
 
 0.679
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
0.621
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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