Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rasal2RAS protein activator-like 2. (1343 aa)    
Predicted Functional Partners:
zcrb1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
    
 
 0.800
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
    
 
 0.665
rasa4
RAS p21 protein activator 4.
   
 0.649
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.644
ENSDARP00000146561
Si:ch211-1i11.3.
    
 0.644
tnfrsf1b
Tumor necrosis factor receptor superfamily, member 1B.
   
 
  0.601
phf3
PHD finger protein 3.
      
 0.595
homer1b
Homer scaffold protein 1b.
    
 
 0.578
rap1ab
RAP1A, member of RAS oncogene family b.
    
 0.575
yme1l1b
YME1-like 1b.
      
 0.567
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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