STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7FCW4_DANRESi:ch211-247n2.1. (261 aa)    
Predicted Functional Partners:
kcnma1a
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
    
 0.936
E7EY50_DANRE
Si:ch211-38m6.7.
  
  
0.925
kcnma1b
Uncharacterized protein.
    
 0.910
kcnmb2
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
  
  
 
0.902
prkg1a
cGMP-dependent protein kinase.
   
 
  0.900
prkg1b
cGMP-dependent protein kinase.
     
  0.900
GNB4
G protein subunit beta 4.
      
 0.742
tbl1xr1b
Tbl1x receptor 1b.
      
 0.742
slc12a7a
Solute carrier family 12 member 7a.
      
 0.669
prkacab
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
     
  0.650
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.