Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbm4.1RNA-binding protein 4.1. (419 aa)    
Predicted Functional Partners:
rbm11
RNA-binding motif protein 11.
      
 0.782
snu13a
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 
 0.762
hnrnph1l
Heterogeneous nuclear ribonucleoprotein H1,-like.
   
 
 0.756
hnrnpabb
Heterogeneous nuclear ribonucleoprotein A/Bb.
    
 
 0.736
rnf34a
Ring finger protein 34a.
      
 0.720
rnf34b
Ring finger protein 34b.
      
 0.720
cnot4a
CCR4-NOT transcription complex, subunit 4a.
      
 0.719
ivns1abpb
Influenza virus NS1A-binding protein homolog B; Plays a role in cell division and in the dynamic organization of the actin skeleton as a stabilizer of actin filaments by association with F-actin through Kelch repeats.
    
 
 0.693
rnf213b
E3 ubiquitin-protein ligase rnf213-beta; Has both E3 ubiquitin-protein ligase and ATPase activities. Belongs to the AAA ATPase family.
      
 0.683
rps26l
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
      
 0.682
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.