STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc3a2aSolute carrier family 3 member 2a. (485 aa)    
Predicted Functional Partners:
slc7a5
Solute carrier family 7 member 5.
   
 0.998
slc7a11
Solute carrier family 7 member 11.
   
 0.981
F1QSV1_DANRE
Si:ch73-352p4.8.
   
 0.966
slc3a2b
Solute carrier family 3 member 2b.
  
  
 
0.904
zgc:158423
Zgc:158423.
  
  
 
0.902
slc7a6
Y+L amino acid transporter 2; Involved in the sodium-independent uptake of dibasic amino acids and sodium-dependent uptake of some neutral amino acids. Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
   
 
 0.840
slc7a10a
Solute carrier family 7 member 10a.
   
 
 0.837
slc7a8b
Solute carrier family 7 member 8b.
   
 
 0.825
slc7a7
Solute carrier family 7 member 7.
   
 
 0.816
slc1a4
Amino acid transporter.
   
 
 0.763
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.