STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cab39lCalcium-binding protein 39-like. (334 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.964
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.949
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.924
strada
STE20-related adaptor alpha.
    
 0.917
wu:fj77h11
Protein kinase domain-containing protein.
    
 0.917
cab39l1
Calcium-binding protein 39,-like 1.
  
 
 
0.902
cab39
Calcium-binding protein 39.
  
  
 
0.901
armc3
Armadillo repeat-containing 3.
      
 0.698
stk25b
Serine/threonine kinase 25 (STE20 homolog, yeast).
   
 
 0.603
stk24b
Serine/threonine kinase 24b (STE20 homolog, yeast).
   
 
 0.603
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.