STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnrnpa1bHeterogeneous nuclear ribonucleoprotein A1b. (403 aa)    
Predicted Functional Partners:
srsf2a
Serine and arginine-rich-splicing factor 2a.
  
 0.953
drosha
Drosha ribonuclease III.
   
 
 0.902
adarb2
Adenosine deaminase RNA-specific B2 (inactive).
   
 
 0.894
puraa
Purine-rich element-binding protein Aa.
    
 
 0.887
tnpo1
Transportin 1.
   
 
 0.886
atxn2
Ataxin 2.
    
 
 0.880
hnrnpl2
Heterogeneous nuclear ribonucleoprotein L2.
   
 0.866
C13H9orf72
Zgc:100846.
      
 0.861
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.854
hnrnpub
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.852
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.