Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hnrnpa1bHeterogeneous nuclear ribonucleoprotein A1b. (403 aa)    
Predicted Functional Partners:
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
0.968
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.967
rbmx
RNA-binding motif protein, X chromosome; RNA-binding protein that plays several role in the regulation of pre- and post-transcriptional processes. Implicated in tissue- specific regulation of gene transcription and alternative splicing of pre-mRNAs. Associates with chromatin. Associates with nascent mRNAs transcribed by RNA polymerase II. Component of the supraspliceosome complex that regulates pre-mRNA alternative splice site selection. Binds non-specifically to pre-mRNAs (By similarity). Required for embryonic development, in particular of the brain.
  
0.960
hnrnpc
Heterogeneous nuclear ribonucleoprotein C.
   
 0.947
hnrnpub
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.941
srsf2a
Serine and arginine-rich-splicing factor 2a.
  
 0.910
hnrpkl
Heterogeneous nuclear ribonucleoprotein K,-like.
   
 0.902
zgc:55733
Zgc:55733.
   
 0.898
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
     
  0.871
atxn2
Ataxin 2.
    
 
 0.851
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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