Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf865Zinc finger protein 865. (1506 aa)    
Predicted Functional Partners:
X1WH50_DANRE
Si:ch211-137a8.4.
  
   0.530
F6P0E6_DANRE
Si:ch211-214c7.4.
  
   0.525
atf5a
Activating transcription factor 5a.
  
 
   0.460
tasor2
Transcription activation suppressor family member 2.
  
    0.444
efs
Embryonal Fyn-associated substrate.
  
   0.435
cdca3
Si:ch211-69g19.2.
  
     0.432
homeza
Homeobox and leucine zipper encoding a.
  
 
   0.431
ENSDARP00000130659
Si:dkey-260j18.2.
  
    0.428
nrl
Leucine zipper transcription factor.
  
 
   0.413
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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