STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf865Zinc finger protein 865. (1506 aa)    
Predicted Functional Partners:
X1WH50_DANRE
Si:ch211-137a8.4.
  
   0.545
F6P0E6_DANRE
Si:ch211-214c7.4.
  
   0.539
atf5a
Activating transcription factor 5a.
  
 
   0.459
homeza
Homeobox and leucine zipper encoding a.
  
 
   0.451
efs
Embryonal Fyn-associated substrate.
  
   0.443
cdca3
Si:ch211-69g19.2.
  
     0.432
tasor2
Transcription activation suppressor family member 2.
  
     0.428
nrl
Leucine zipper transcription factor.
  
 
   0.412
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.