STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hax1HCLS1-associated protein X-1. (286 aa)    
Predicted Functional Partners:
aqp10b
Aquaporin 10b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.806
pygo2
Pygopus homolog 2 (Drosophila).
      
 0.741
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
      
 0.720
clpb
Caseinolytic mitochondrial matrix peptidase chaperone subunit B.
      
 0.720
HTRA2
Si:dkey-84o3.4.
    
 
 0.654
LOC799006
Si:dkey-265c15.6.
    
 
 0.653
cks1b
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
      
 0.647
vps45
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.645
csf3r
Colony-stimulating factor 3 receptor (granulocyte).
      
 0.588
g6pc3
Glucose-6-phosphatase 3; Hydrolyzes glucose-6-phosphate to glucose in the endoplasmic reticulum. May be responsible for glucose production through glycogenolysis and gluconeogenesis (By similarity); Belongs to the glucose-6-phosphatase family.
      
 0.582
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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