STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
commd7COMM domain-containing 7. (200 aa)    
Predicted Functional Partners:
commd2
COMM domain-containing 2.
   
 0.925
ccdc22
Coiled-coil domain-containing protein 22; May be involved in regulation of NF-kappa-B signaling. May be involved in copper-dependent atp7a trafficking between the trans-Golgi network and vesicles in the cell periphery (By similarity).
   
 0.897
commd8
COMM domain-containing 8.
    
 0.883
commd6
COMM domain-containing 6.
   
 0.870
commd4
COMM domain-containing 4.
    
 0.865
commd1
Copper metabolism (Murr1) domain-containing 1.
    
 0.860
commd3
COMM domain-containing 3.
   
 0.858
commd9
Si:ch211-154e15.3 protein.
   
 0.822
commd5
COMM domain-containing 5.
   
 0.793
nol4lb
Nucleolar protein 4-like b.
 
    
 0.765
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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