Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
scamp1Secretory carrier-associated membrane protein. (338 aa)    
Predicted Functional Partners:
scamp3
Secretory carrier-associated membrane protein.
   
   0.787
scamp2l
Secretory carrier-associated membrane protein.
    
   0.779
scamp2
Secretory carrier-associated membrane protein.
    
   0.779
arl5a
Novel protein similar to vertebrate ADP-ribosylation factor-like 8 (ARL8); Belongs to the small GTPase superfamily. Arf family.
    
 
 0.667
syngr2b
Synaptogyrin.
   
 
 0.649
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
  
 0.641
fyco1a
FYVE and coiled-coil domain autophagy adaptor 1a.
      
 0.635
fyco1b
FYVE and coiled-coil domain autophagy adaptor 1b.
      
 0.635
drg2
Developmentally-regulated GTP-binding protein 2.
   
  
 0.623
eapp
E2f-associated phosphoprotein.
      
 0.618
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.