STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
st6galnac6Belongs to the glycosyltransferase 29 family. (326 aa)    
Predicted Functional Partners:
b3gnt3.4
Hexosyltransferase.
      
 0.935
st3gal3a
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a; Belongs to the glycosyltransferase 29 family.
   
  
 0.840
b3gnt5a
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A; Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids; Belongs to the glycosyltransferase 31 family.
      
 0.666
galnt12
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.656
Q5RGZ8_DANRE
Si:dkey-202b22.6.
   
    0.641
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
      
 0.627
c1galt1b
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
    
 
 0.604
b3galt2
Hexosyltransferase.
      
 0.584
b3galt1a
Hexosyltransferase.
      
 0.578
Galnt5
Ricin B-type lectin domain-containing protein.
      
 0.574
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.