banf1 protein (Danio rerio) - STRING interaction network

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banf1

Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity). (90 aa)

Predicted Functional Partners:

emd

0.996

smarca4a

0.931

lmnb2

0.887

lmna

0.882

smarce1

0.877

lbr

0.862

smarcc2

0.856

smarcd1

0.854

actl6a

0.840

arid1b

0.818

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
actl6a	arid1b	ENSDARP00000095078	ENSDARP00000139784	Actin-like 6A; Belongs to the actin family.	AT-rich interactive domain 1B (SWI1-like).	0.855
actl6a	banf1	ENSDARP00000095078	ENSDARP00000053793	Actin-like 6A; Belongs to the actin family.	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	0.840
actl6a	smarca4a	ENSDARP00000095078	ENSDARP00000143385	Actin-like 6A; Belongs to the actin family.	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 4a.	0.927
actl6a	smarcc2	ENSDARP00000095078	ENSDARP00000099015	Actin-like 6A; Belongs to the actin family.	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 2.	0.949
actl6a	smarcd1	ENSDARP00000095078	ENSDARP00000009407	Actin-like 6A; Belongs to the actin family.	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 1.	0.939
actl6a	smarce1	ENSDARP00000095078	ENSDARP00000112446	Actin-like 6A; Belongs to the actin family.	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily e, member 1.	0.975
arid1b	actl6a	ENSDARP00000139784	ENSDARP00000095078	AT-rich interactive domain 1B (SWI1-like).	Actin-like 6A; Belongs to the actin family.	0.855
arid1b	banf1	ENSDARP00000139784	ENSDARP00000053793	AT-rich interactive domain 1B (SWI1-like).	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	0.818
arid1b	smarca4a	ENSDARP00000139784	ENSDARP00000143385	AT-rich interactive domain 1B (SWI1-like).	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 4a.	0.968
arid1b	smarcc2	ENSDARP00000139784	ENSDARP00000099015	AT-rich interactive domain 1B (SWI1-like).	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 2.	0.953
arid1b	smarcd1	ENSDARP00000139784	ENSDARP00000009407	AT-rich interactive domain 1B (SWI1-like).	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily d, member 1.	0.909
arid1b	smarce1	ENSDARP00000139784	ENSDARP00000112446	AT-rich interactive domain 1B (SWI1-like).	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily e, member 1.	0.989
banf1	actl6a	ENSDARP00000053793	ENSDARP00000095078	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Actin-like 6A; Belongs to the actin family.	0.840
banf1	arid1b	ENSDARP00000053793	ENSDARP00000139784	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	AT-rich interactive domain 1B (SWI1-like).	0.818
banf1	emd	ENSDARP00000053793	ENSDARP00000117124	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Emerin (Emery-Dreifuss muscular dystrophy).	0.996
banf1	lbr	ENSDARP00000053793	ENSDARP00000015055	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin B receptor.	0.862
banf1	lmna	ENSDARP00000053793	ENSDARP00000156524	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin A; Belongs to the intermediate filament family.	0.882
banf1	lmnb2	ENSDARP00000053793	ENSDARP00000139279	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin B2; Belongs to the intermediate filament family.	0.887
banf1	smarca4a	ENSDARP00000053793	ENSDARP00000143385	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 4a.	0.931
banf1	smarcc2	ENSDARP00000053793	ENSDARP00000099015	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 2.	0.856

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