Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc3a2bSolute carrier family 3 member 2b. (504 aa)    
Predicted Functional Partners:
F1QSV1_DANRE
Si:ch73-352p4.8.
   
 0.983
slc7a11
Solute carrier family 7 member 11.
   
 0.983
slc7a5
Solute carrier family 7 member 5.
   
 0.964
slc3a2a
Solute carrier family 3 member 2a.
     
  0.868
zgc:158423
Zgc:158423.
     
  0.868
slc25a36a
Solute carrier family 25 member 36-A.
   
  
 0.778
slc7a8a
Solute carrier family 7 member 8a.
   
 0.741
slc2a3b
Solute carrier family 2 member 3b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.720
slc7a10a
Solute carrier family 7 member 10a.
   
 0.670
slc7a8b
Solute carrier family 7 member 8b.
   
 0.670
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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