STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptger2bProstaglandin E receptor 2b (subtype EP2). (341 aa)    
Predicted Functional Partners:
mrs2
Magnesium transporter.
      
 0.742
pdcd5
Programmed cell death 5.
      
 0.669
zbtb17
Zinc finger and BTB domain-containing 17.
      
 0.662
gnal
Guanine nucleotide-binding protein G(olf) subunit alpha.
    
 
 0.566
LOC108179047
Guanine nucleotide-binding protein G(s) subunit alpha.
    
 
 0.566
gnas
GNAS complex locus.
    
 
 0.566
Gnal2
Uncharacterized protein.
    
 
 0.566
ENSDARP00000153033
Uncharacterized protein.
    
 
 0.566
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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