Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC568037HIVEP zinc finger 3b. (1974 aa)    
Predicted Functional Partners:
edn1
Endothelin 1.
     
 0.648
ednrab
Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family.
    
  0.642
ttll9
Tubulin tyrosine ligase-like family, member 9.
     
  0.639
gpr84
G protein-coupled receptor 84.
    
 
 0.609
fhad1
Forkhead-associated (FHA) phosphopeptide-binding domain 1.
    
 
 0.574
rad17
RAD17 checkpoint clamp loader component.
    
 
 0.563
nfe2
Nuclear factor, erythroid 2.
      
 0.560
fbxw11b
F-box and WD repeat domain-containing 11b.
    
  0.551
fbxw11a
F-box and WD repeat domain-containing 11a.
    
  0.551
irx3a
Iroquois 3 homeobox protein.
    
 0.545
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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