Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
E7F7H4_DANRESi:ch211-145b13.5. (225 aa)    
Predicted Functional Partners:
kcnip3b
Kv channel-interacting protein 3b, calsenilin.
  
  
 
0.804
kcnd3
Potassium voltage-gated channel, Shal-related subfamily, member 3; Belongs to the potassium channel family.
    
 0.768
kcnd1
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
    
 0.768
kcnd2
Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.
    
 0.768
pi4kb
Phosphatidylinositol 4-kinase beta; Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol- 1,4,5,-trisphosphate (PIP).
    
 
 0.449
cmbl
Carboxymethylenebutenolidase homolog (Pseudomonas).
    
 
 0.420
wdr90
WD repeat domain 90.
    
   0.415
caska
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 0.409
caskb
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.409
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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