STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsg1lGerm cell-specific gene 1-like protein; As a component of the AMPAR complex, modifies AMPA receptor (AMPAR) gating. (304 aa)    
Predicted Functional Partners:
cnih2
Protein cornichon homolog 2; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs); Belongs to the cornichon family.
      
 0.868
SYNDIG1
Synapse differentiation inducing 1.
      
 0.860
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.850
tmem91
Transmembrane protein 91.
      
 0.806
syndig1l
Synapse differentiation-inducing gene protein 1-like.
   
  
 0.745
ppid
Peptidylprolyl isomerase D (Cyclophilin D).
      
 0.729
cnih3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.694
spats1
Uncharacterized protein.
      
 0.690
rergla
Ras-related and estrogen-regulated growth inhibitor-like protein; Binds GDP/GTP and may possess intrinsic GTPase activity.
   
  
 0.676
zgc:171704
Zgc:171704.
      
 0.670
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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