STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rtn4rl2bReticulon 4 receptor-like 2b. (457 aa)    
Predicted Functional Partners:
pvalb9
Parvalbumin 9; Belongs to the parvalbumin family.
    
 
 0.845
ssuh2rs1
Protein SSUH2 homolog; Plays a role in odontogenesis.
      
 0.832
s100s
Protein S100; Belongs to the S-100 family.
      
 0.832
sec11a
Signal peptidase complex catalytic subunit SEC11.
      
 0.736
smtnl1
Smoothelin-like 1.
      
 0.706
gp1bb
Glycoprotein Ib platelet subunit beta.
     
  0.700
mibp
Muscle-specific beta 1 integrin-binding protein.
    
 
 0.655
tnfrsf19
Tumor necrosis factor receptor superfamily, member 19.
      
 0.644
ngfrb
Nerve growth factor receptor b.
      
 0.644
otofb
Otoferlin b.
      
 0.616
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.