Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kctd12bPotassium channel tetramerisation domain-containing 12b. (281 aa)    
Predicted Functional Partners:
sox1a
Transcription factor Sox-1a; Transcriptional activator.
    
 
 0.607
kcnd1
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
      
 0.503
kcnh3
Potassium voltage-gated channel, subfamily H (eag-related), member 3.
      
 0.501
acod1
Aconitate decarboxylase 1.
      
 0.486
gabbr2
Gamma-aminobutyric acid (GABA) B receptor, 2.
   
 
 0.474
SHKBP1
SH3KBP1 binding protein 1.
    
 
0.448
hcn3
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 3.
      
 0.419
sgce
Sarcoglycan, epsilon.
      
 0.419
KCTD15
Potassium channel tetramerization domain containing 15.
    
 
 0.410
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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