Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
asb12bAnkyrin repeat and SOCS box-containing 12b. (308 aa)    
Predicted Functional Partners:
dcun1d4
DCN1-like protein 4.
    
 0.593
dcun1d5
DCN1-like protein.
    
 0.593
pwwp2b
PWWP domain-containing 2B.
      
 0.546
asb3
Ankyrin repeat and SOCS box-containing 3.
  
  
0.530
eloca
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.529
asb11
Ankyrin repeat and SOCS box containing protein a.
  
 
 
0.527
rlim
Ring finger protein, LIM domain-interacting.
    
 
 0.527
commd1
Copper metabolism (Murr1) domain-containing 1.
    
  0.522
commd4
COMM domain-containing 4.
    
  0.512
cul2
Cullin 2; Belongs to the cullin family.
    
 0.512
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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