STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb12bAnkyrin repeat and SOCS box-containing 12b. (308 aa)    
Predicted Functional Partners:
asb6
Ankyrin repeat and SOCS box-containing 6.
  
  
 0.650
dcun1d4
DCN1-like protein 4.
    
 0.555
dcun1d5
DCN1-like protein.
    
 0.555
asb2a.1
Ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1.
  
 
0.552
commd8
COMM domain-containing 8.
   
  0.540
asb14a
Ankyrin repeat and SOCS box-containing 14a.
  
 
 
0.540
nedd8
NEDD8 ubiquitin-like modifier.
   
  0.539
commd4
COMM domain-containing 4.
    
 0.530
commd1
Copper metabolism (Murr1) domain-containing 1.
    
  0.528
wsb1
WD repeat and SOCS box-containing protein 1; Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
    
 0.517
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.