Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gssGlutathione synthetase. (475 aa)    
Predicted Functional Partners:
gclc
Glutamate-cysteine ligase, catalytic subunit.
   
 0.995
gclm
Glutamate-cysteine ligase, modifier subunit.
   
 0.993
gsr
Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.989
ggt5b
Uncharacterized protein.
   
 
 0.989
ggt5a
Gamma-glutamyltransferase 5a.
   
 
 0.987
ggt1b
Gamma-glutamyltransferase 1b.
   
 
 0.983
ENSDARP00000145322
Si:ch73-337l15.2.
   
 
 0.981
GGT7
Gamma-glutamyltransferase 7.
   
 
 0.981
ggctb
Gamma-glutamylcyclotransferase b.
     
 0.965
gpx7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.963
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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