STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp7aATPase copper-transporting alpha. (1500 aa)    
Predicted Functional Partners:
atox1
Antioxidant 1 copper chaperone.
    
 0.999
ccs
Copper chaperone for superoxide dismutase.
  
 0.986
LOC110439923
Copper chaperone for superoxide dismutase.
  
 0.986
cox17
COX17 cytochrome c oxidase assembly homolog (S. cerevisiae).
      
 0.935
pdzd11
PDZ domain-containing protein 11.
    
 0.925
slc31a1
Solute carrier family 31 member 1.
    
 
 0.906
cp
Ceruloplasmin; Belongs to the multicopper oxidase family.
  
 
 0.850
cox11
Cytochrome c oxidase assembly homolog 11 (yeast).
      
 0.797
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.783
pam
Peptidylglycine alpha-amidating monooxygenase.
      
 0.773
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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