STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgals3bpaGalectin-3-binding protein A; Promotes integrin-mediated cell adhesion. (567 aa)    
Predicted Functional Partners:
il12rb2l
Interleukin 12 receptor, beta 2a,-like.
    
 
 0.804
wipf1a
WAS/WASL-interacting protein family, member 1a.
      
 0.804
cmklr1l1
Chemokine-like receptor 1 like 2; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.755
hcst
Hematopoietic cell signal transducer.
      
 0.713
sqleb
Squalene epoxidase b.
      
 0.698
ccl35.2
Chemokine (C-C motif) ligand 35, duplicate 2.
   
 
 0.692
ccl34b.1
Chemokine (C-C motif) ligand 34b, duplicate 1.
   
  
 0.669
lgals9l3
Galectin.
   
 
 0.634
il12ba
Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.
   
 
 0.600
sqlea
Squalene epoxidase a.
      
 0.544
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.