Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cln3 | cln5 | ENSDARP00000055169 | ENSDARP00000097549 | Battenin. | Uncharacterized protein. | 0.980 |
cln3 | cln6a | ENSDARP00000055169 | ENSDARP00000142908 | Battenin. | CLN6 transmembrane ER protein a. | 0.937 |
cln3 | cln8 | ENSDARP00000055169 | ENSDARP00000124599 | Battenin. | CLN8 transmembrane ER and ERGIC protein. | 0.669 |
cln3 | ctsd | ENSDARP00000055169 | ENSDARP00000074872 | Battenin. | Ctsd protein; Belongs to the peptidase A1 family. | 0.790 |
cln3 | ctsf | ENSDARP00000055169 | ENSDARP00000132041 | Battenin. | Cathepsin F; Belongs to the peptidase C1 family. | 0.749 |
cln3 | hmgcl | ENSDARP00000055169 | ENSDARP00000026028 | Battenin. | 3-hydroxy-3-methylglutaryl-CoA lyase. | 0.886 |
cln3 | hmgcll1 | ENSDARP00000055169 | ENSDARP00000133158 | Battenin. | 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic; Non-mitochondrial 3-hydroxymethyl-3-methylglutaryl-CoA lyase that catalyzes a cation-dependent cleavage of (S)-3-hydroxy-3- methylglutaryl-CoA into acetyl-CoA and acetoacetate, a key step in ketogenesis, the products of which support energy production in nonhepatic animal tissues. | 0.882 |
cln3 | mfsd8 | ENSDARP00000055169 | ENSDARP00000140706 | Battenin. | Major facilitator superfamily domain-containing protein 8; May be a carrier that transport small solutes by using chemiosmotic ion gradients; Belongs to the major facilitator superfamily. | 0.930 |
cln3 | ppt1 | ENSDARP00000055169 | ENSDARP00000058490 | Battenin. | Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). | 0.898 |
cln3 | tpp1 | ENSDARP00000055169 | ENSDARP00000124672 | Battenin. | Tripeptidyl-peptidase 1; Lysosomal serine protease with tripeptidyl-peptidase I activity. May act as a non-specific lysosomal peptidase which generates tripeptides from the breakdown products produced by lysosomal proteinases (By similarity). Requires substrates with an unsubstituted N-terminus (By similarity). | 0.858 |
cln5 | cln3 | ENSDARP00000097549 | ENSDARP00000055169 | Uncharacterized protein. | Battenin. | 0.980 |
cln5 | cln6a | ENSDARP00000097549 | ENSDARP00000142908 | Uncharacterized protein. | CLN6 transmembrane ER protein a. | 0.977 |
cln5 | cln8 | ENSDARP00000097549 | ENSDARP00000124599 | Uncharacterized protein. | CLN8 transmembrane ER and ERGIC protein. | 0.694 |
cln5 | ctsd | ENSDARP00000097549 | ENSDARP00000074872 | Uncharacterized protein. | Ctsd protein; Belongs to the peptidase A1 family. | 0.715 |
cln5 | ctsf | ENSDARP00000097549 | ENSDARP00000132041 | Uncharacterized protein. | Cathepsin F; Belongs to the peptidase C1 family. | 0.719 |
cln5 | mfsd8 | ENSDARP00000097549 | ENSDARP00000140706 | Uncharacterized protein. | Major facilitator superfamily domain-containing protein 8; May be a carrier that transport small solutes by using chemiosmotic ion gradients; Belongs to the major facilitator superfamily. | 0.923 |
cln5 | ppt1 | ENSDARP00000097549 | ENSDARP00000058490 | Uncharacterized protein. | Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). | 0.912 |
cln5 | tpp1 | ENSDARP00000097549 | ENSDARP00000124672 | Uncharacterized protein. | Tripeptidyl-peptidase 1; Lysosomal serine protease with tripeptidyl-peptidase I activity. May act as a non-specific lysosomal peptidase which generates tripeptides from the breakdown products produced by lysosomal proteinases (By similarity). Requires substrates with an unsubstituted N-terminus (By similarity). | 0.825 |
cln6a | cln3 | ENSDARP00000142908 | ENSDARP00000055169 | CLN6 transmembrane ER protein a. | Battenin. | 0.937 |
cln6a | cln5 | ENSDARP00000142908 | ENSDARP00000097549 | CLN6 transmembrane ER protein a. | Uncharacterized protein. | 0.977 |
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