STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itga3aIntegrin, alpha 3a; Belongs to the integrin alpha chain family. (1053 aa)    
Predicted Functional Partners:
Reln
Reelin domain-containing protein.
    
 0.918
fn1a
Fibronectin 1a.
     
 0.912
itgb1a
Integrin beta; Belongs to the integrin beta chain family.
   
 0.906
itga3b
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
  
  
 
0.903
itgb1b.1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.902
itgb1b.2
Integrin beta; Belongs to the integrin beta chain family.
   
 0.899
itgb1b
Integrin beta; Belongs to the integrin beta chain family.
   
 0.893
lama5
Laminin, alpha 5.
   
 0.822
ptk2ab
Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.812
lamb1a
Laminin, beta 1a.
    
 0.795
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.