Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ca10bCarbonic anhydrase Xb; Belongs to the alpha-carbonic anhydrase family. (326 aa)    
Predicted Functional Partners:
psmg2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg1; Belongs to the PSMG2 family.
    
 
 0.633
ccar1
Cell division cycle and apoptosis regulator 1.
    
 
 0.628
atxn3
Ataxin 3.
      
 0.622
brd7
Bromodomain-containing 7.
      
 0.611
utp18
UTP18 small subunit processome component.
   
  
 0.608
rpf2
Ribosome production factor 2 homolog.
   
 
 0.586
nsfa
N-ethylmaleimide-sensitive factor a.
      
 0.555
psmg1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2; Belongs to the PSMG1 family.
    
   0.548
ca6
Carbonic anhydrase VI; Belongs to the alpha-carbonic anhydrase family.
  
   
0.542
flad1
Molybdenum cofactor biosynthesis protein-like region; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme; In the N-terminal section; belongs to the MoaB/Mog family.
    
   0.537
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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