STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex26Peroxisomal biogenesis factor 26. (313 aa)    
Predicted Functional Partners:
pex6
Peroxisomal biogenesis factor 6.
    
 0.989
pex1
Peroxisomal biogenesis factor 1.
    
 0.930
pex19
Peroxisomal biogenesis factor 19.
   
 0.924
pex3
Peroxisomal biogenesis factor 3.
   
 0.911
pex10
Peroxisomal biogenesis factor 10.
   
 
 0.896
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.893
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.893
pex16
Peroxisomal membrane protein PEX16; Involved in peroxisome biogenesis. Belongs to the peroxin-16 family.
   
 
 0.877
pex7
Peroxisomal biogenesis factor 7.
   
 
 0.845
atad1b
ATPase family AAA domain-containing protein 1-B; ATPase that plays a critical role in regulating the surface expression of AMPA receptors (AMPAR). Required for NMDA-stimulated AMPAR internalization in an ATPase-dependent manner (By similarity).
    
 0.837
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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