STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gskipGSK3-beta interaction protein. (147 aa)    
Predicted Functional Partners:
gsk3bb
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
    
 
 0.676
tmem198b
Transmembrane protein 198-B.
      
 0.667
LOC100330186
Coiled-coil domain-containing 136b.
      
 0.648
ccdc136b
Coiled-coil domain-containing 136b.
      
 0.648
gsk3aa
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
   
 
 0.639
gsk3ab
Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily.
   
 
 0.637
gsk3ba
Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily.
    
 
 0.633
ctnnd2b
Catenin (cadherin-associated protein), delta 2b.
   
  
 0.570
ppm1ab
Protein phosphatase, Mg2+/Mn2+-dependent, 1Ab.
      
 0.567
atg2b
Autophagy-related 2B.
      
 0.567
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.