Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hbbe3Hemoglobin beta embryonic-3; Belongs to the globin family. (147 aa)    
Predicted Functional Partners:
hbae3
Hemoglobin alpha embryonic-3; Belongs to the globin family.
  
0.961
hbba2
Hemoglobin, beta adult 2; Belongs to the globin family.
  
0.946
hbae5
Hemoglobin, alpha embryonic 5; Belongs to the globin family.
  
0.946
zgc:163057
Zgc:163057 protein; Belongs to the globin family.
  
0.945
hbba1
Hemoglobin subunit beta-1; Involved in oxygen transport from gills to the various peripheral tissues; Belongs to the globin family.
  
0.945
hbae1.2
Hemoglobin, alpha embryonic 1.1; Belongs to the globin family.
  
 
0.945
hbaa2
Hemoglobin, alpha adult 2; Belongs to the globin family.
  
0.941
bY187G17.1-001
Novel protein similar to zebrafish hemoglobin alpha-adult 1 (Hbaa1); Belongs to the globin family.
  
 
0.941
hbaa1
Hemoglobin subunit alpha; Involved in oxygen transport from gills to the various peripheral tissues.
  
 
0.941
hbbe2
Hemoglobin beta embryonic-2; Belongs to the globin family.
  
 
0.925
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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