Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ggact.2Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. (191 aa)    
Predicted Functional Partners:
matn3a
Novel protein similar to vertebrate matrilin 3 (MATN3) (Zgc:101120).
      
 0.800
crygm2d18
Crystallin, gamma M2d18; Belongs to the beta/gamma-crystallin family.
      
 0.794
olfcb1
Olfactory receptor C family, b1.
      
 0.782
tcima
Transcriptional and immune response regulator a.
      
 0.782
map1lc3cl
Microtubule-associated protein 1 light chain 3 gamma,-like.
      
 0.782
cryba1b
Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.
      
 0.780
R4GE45_DANRE
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.774
ora3
Taste receptor type 2.
      
 0.755
prg4a
Proteoglycan 4a.
      
 0.668
xkr8.2
XK-related protein.
      
 0.663
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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