Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDARP00000117118 | ggact.2 | ENSDARP00000117118 | ENSDARP00000055778 | Thioredoxin reductase 2, tandem duplicate 1. | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | 0.445 |
dldh | ggact.2 | ENSDARP00000017217 | ENSDARP00000055778 | Dihydrolipoyl dehydrogenase. | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | 0.436 |
ggact.2 | ENSDARP00000117118 | ENSDARP00000055778 | ENSDARP00000117118 | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | Thioredoxin reductase 2, tandem duplicate 1. | 0.445 |
ggact.2 | dldh | ENSDARP00000055778 | ENSDARP00000017217 | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | Dihydrolipoyl dehydrogenase. | 0.436 |
ggact.2 | gsr | ENSDARP00000055778 | ENSDARP00000047049 | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.436 |
ggact.2 | txnrd2.2 | ENSDARP00000055778 | ENSDARP00000103469 | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | Thioredoxin reductase 2, tandem duplicate 2. | 0.445 |
ggact.2 | txnrd3 | ENSDARP00000055778 | ENSDARP00000135844 | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | Thioredoxin reductase 3. | 0.437 |
gsr | ggact.2 | ENSDARP00000047049 | ENSDARP00000055778 | Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | 0.436 |
txnrd2.2 | ggact.2 | ENSDARP00000103469 | ENSDARP00000055778 | Thioredoxin reductase 2, tandem duplicate 2. | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | 0.445 |
txnrd2.2 | txnrd3 | ENSDARP00000103469 | ENSDARP00000135844 | Thioredoxin reductase 2, tandem duplicate 2. | Thioredoxin reductase 3. | 0.909 |
txnrd3 | ggact.2 | ENSDARP00000135844 | ENSDARP00000055778 | Thioredoxin reductase 3. | Gamma-glutamylaminecyclotransferase B; May contribute to degradation of proteins cross-linked by transglutaminases by degrading the cross-link between a lysine and a glutamic acid residue. Catalyzes the formation of 5-oxo-L-proline from L-gamma-glutamyl-L-epsilon-lysine; Belongs to the gamma-glutamylcyclotransferase family. | 0.437 |
txnrd3 | txnrd2.2 | ENSDARP00000135844 | ENSDARP00000103469 | Thioredoxin reductase 3. | Thioredoxin reductase 2, tandem duplicate 2. | 0.909 |