Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
jpt2Jupiter microtubule-associated homolog 2. (218 aa)    
Predicted Functional Partners:
lsm12b
Protein LSM12 homolog A; Belongs to the LSM12 family.
   
  
 0.956
tpcn3
Two pore segment channel 3.
      
 0.902
ube2q2
Ubiquitin-conjugating enzyme E2Q family member 2.
   
  
 0.848
scarb2c
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
      
 0.800
tpcn2
Two pore calcium channel protein 2; Nicotinic acid adenine dinucleotide phosphate (NAADP) receptor that may function as one of the major voltage-gated Ca(2+) channels (VDCC) across the lysosomal membrane. May be involved in smooth muscle contraction (By similarity).
      
 0.777
arsg
Arylsulfatase G.
      
 0.771
znhit1
Zinc finger, HIT-type-containing 1.
   
  
 0.712
cramp1
Cramped chromatin regulator homolog 1.
      
 0.708
mtrex
Mtr4 exosome RNA helicase.
    
 
 0.701
tmem63a
Transmembrane protein 63A.
      
 0.692
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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