Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
natd1Protein NATD1; Belongs to the NATD1 family. (110 aa)    
Predicted Functional Partners:
atf7ip2
Activating transcription factor 7-interacting protein 2.
    
 0.746
h3f3c
H3 histone, family 3C.
    
 
 0.727
hells
Helicase, lymphoid-specific.
    
 
 0.710
snx29
Sorting nexin 29.
      
 0.663
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
    
 0.602
dusp1
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 0.591
sh3bgr
SH3 domain-binding glutamate-rich protein.
      
 0.582
esco2
N-acetyltransferase ESCO2; Acetyltransferase required for the establishment of sister chromatid cohesion. Couples the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together (By similarity). Essential for early development.
    
 
 0.519
esco1
Establishment of sister chromatid cohesion N-acetyltransferase 1.
    
 
 0.519
clec14a
C-type lectin domain-containing 14A.
      
 0.448
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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