Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| copb2 | lamtor1 | ENSDARP00000044330 | ENSDARP00000103059 | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. | 0.452 |
| copb2 | rab1ba | ENSDARP00000044330 | ENSDARP00000055809 | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | ZRAB1B, member RAS oncogene family a. | 0.724 |
| copb2 | uso1 | ENSDARP00000044330 | ENSDARP00000101948 | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | USO1 homolog, vesicle docking protein (Yeast). | 0.609 |
| gdi2 | rab1ba | ENSDARP00000009258 | ENSDARP00000055809 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | ZRAB1B, member RAS oncogene family a. | 0.617 |
| gdi2 | trappc1 | ENSDARP00000009258 | ENSDARP00000056934 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.455 |
| gdi2 | trappc2 | ENSDARP00000009258 | ENSDARP00000136695 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.435 |
| gdi2 | trappc3 | ENSDARP00000009258 | ENSDARP00000066711 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.464 |
| gdi2 | trappc4 | ENSDARP00000009258 | ENSDARP00000032254 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.451 |
| gdi2 | trappc5 | ENSDARP00000009258 | ENSDARP00000039210 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.432 |
| gdi2 | trappc8 | ENSDARP00000009258 | ENSDARP00000071563 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Trafficking protein particle complex 8. | 0.415 |
| lamtor1 | copb2 | ENSDARP00000103059 | ENSDARP00000044330 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | 0.452 |
| lamtor1 | rab1ba | ENSDARP00000103059 | ENSDARP00000055809 | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. | ZRAB1B, member RAS oncogene family a. | 0.675 |
| rab1ba | copb2 | ENSDARP00000055809 | ENSDARP00000044330 | ZRAB1B, member RAS oncogene family a. | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | 0.724 |
| rab1ba | gdi2 | ENSDARP00000055809 | ENSDARP00000009258 | ZRAB1B, member RAS oncogene family a. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.617 |
| rab1ba | lamtor1 | ENSDARP00000055809 | ENSDARP00000103059 | ZRAB1B, member RAS oncogene family a. | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. | 0.675 |
| rab1ba | trappc1 | ENSDARP00000055809 | ENSDARP00000056934 | ZRAB1B, member RAS oncogene family a. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.728 |
| rab1ba | trappc2 | ENSDARP00000055809 | ENSDARP00000136695 | ZRAB1B, member RAS oncogene family a. | Trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.682 |
| rab1ba | trappc3 | ENSDARP00000055809 | ENSDARP00000066711 | ZRAB1B, member RAS oncogene family a. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.797 |
| rab1ba | trappc4 | ENSDARP00000055809 | ENSDARP00000032254 | ZRAB1B, member RAS oncogene family a. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.716 |
| rab1ba | trappc5 | ENSDARP00000055809 | ENSDARP00000039210 | ZRAB1B, member RAS oncogene family a. | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.691 |
page 1 of 4