STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phospho1Probable phosphatase phospho1; Probable phosphatase, involved in bone mineralization. Belongs to the HAD-like hydrolase superfamily. PHOSPHO family. (279 aa)    
Predicted Functional Partners:
chkb
Choline kinase beta.
     
 0.941
chata
Choline O-acetyltransferase; Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses. Belongs to the carnitine/choline acetyltransferase family.
     
 0.925
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.924
pcyt1ab
Phosphate cytidylyltransferase 1, choline, alpha b.
     
 0.914
pcyt1aa
Phosphate cytidylyltransferase 1, choline, alpha a.
     
 0.914
pcyt1ba
Phosphate cytidylyltransferase 1, choline, beta a.
     
 0.914
pcyt1bb
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.914
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 
 0.910
chka
Choline kinase alpha.
     
 0.906
pmt
Phosphoethanolamine methyltransferase.
   
 
 0.901
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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