STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd151Tetraspanin. (252 aa)    
Predicted Functional Partners:
tm4sf5
Transmembrane 4 L six family member 5.
      
 0.845
cd44a
CD44 molecule (Indian blood group) a.
    
 
 0.716
egfra
Epidermal growth factor receptor precursor.
    
 
 0.631
itga5
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
   
 
 0.593
itga3b
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 
 0.580
itga3a
Integrin, alpha 3a; Belongs to the integrin alpha chain family.
    
 
 0.554
itgb4
Integrin beta.
    
 
 0.551
zdhhc11
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.544
itgbl1
Integrin, beta-like 1.
    
 
 0.543
tmem35
Transmembrane protein 35A.
      
 0.453
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.