STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100007686Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (202 aa)    
Predicted Functional Partners:
gmppb
Mannose-1-phosphate guanyltransferase beta; Catalyzes the formation of GDP-mannose, an essential precursor of glycan moieties of glycoproteins and glycolipids.
  
 
 0.988
mpi
Mannose-6-phosphate isomerase.
  
 
 0.987
gmppaa
Mannose-1-phosphate guanyltransferase alpha-A; Belongs to the transferase hexapeptide repeat family.
  
 
 0.961
gmppab
Mannose-1-phosphate guanyltransferase alpha-B; Belongs to the transferase hexapeptide repeat family.
  
 
 0.961
hkdc1
Hexokinase domain-containing 1.
     
 0.936
hk1
Hexokinase 1.
     
 0.936
hk2
Hexokinase 2.
     
 0.936
pmm2
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
  
 
0.902
tk1
Thymidine kinase.
   
 
 0.790
yipf6
Protein YIPF6.
    
 0.784
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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