STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
s100zProtein S100; Belongs to the S-100 family. (99 aa)    
Predicted Functional Partners:
s100v1
S100 calcium-binding protein V1; Belongs to the S-100 family.
      
 0.898
s100u
S100 calcium-binding protein U; Belongs to the S-100 family.
      
 0.898
s100v2
S100 calcium-binding protein V2; Belongs to the S-100 family.
   
  
 0.836
f2rl1.2
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2.
   
 
 0.677
iqgap2
IQ motif-containing GTPase-activating protein 2.
    
 
 0.669
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 
 0.579
pvalb8
Pvalb8 protein; Belongs to the parvalbumin family.
   
 
 0.571
sv2ca
Synaptic vesicle glycoprotein 2Ca.
    
 
 0.559
wfikkn1
WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein; Protease-inhibitor that contains multiple distinct protease inhibitor domains. Probably has serine protease- and metalloprotease- inhibitor activity (By similarity).
    
 
 0.556
cyba
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 
  0.543
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.