STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubtflUpstream-binding transcription factor,-like. (719 aa)    
Predicted Functional Partners:
dcaf5
Ddb1 and cul4-associated factor 5.
   
  
 0.857
stk38a
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.809
mapk3
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.759
ap3d1
Adaptor-related protein complex 3 subunit delta 1.
   
  
 0.744
polr1e
Polymerase (RNA) I polypeptide E.
    
 0.738
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.732
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
   
  
 0.727
wdr82
WD repeat-containing protein 82; Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus; Belongs to the WD repeat SWD2 family.
   
 
 0.714
srrm2
Serine/arginine repetitive matrix 2.
   
  
 0.712
gtf2h1
General transcription factor IIH, polypeptide 1.
    
 0.695
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.